Last updated on 2026-03-26 08:50:03 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.4 | 1.52 | 20.13 | 21.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.4 | 1.39 | 16.45 | 17.84 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.4 | 31.64 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.4 | 30.55 | OK | |||
| r-devel-macos-arm64 | 1.0.4 | 1.00 | 16.00 | 17.00 | OK | |
| r-devel-windows-x86_64 | 1.0.4 | 3.00 | 185.00 | 188.00 | OK | |
| r-patched-linux-x86_64 | 1.0.4 | 1.64 | 17.27 | 18.91 | ERROR | |
| r-release-linux-x86_64 | 1.0.4 | 1.57 | 17.16 | 18.73 | OK | |
| r-release-macos-arm64 | 1.0.4 | OK | ||||
| r-release-macos-x86_64 | 1.0.4 | 1.00 | 31.00 | 32.00 | OK | |
| r-release-windows-x86_64 | 1.0.4 | 3.00 | 56.00 | 59.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.0.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.0.4 | 1.00 | 30.00 | 31.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.4 | 4.00 | 50.00 | 54.00 | OK |
Version: 1.0.4
Check: examples
Result: ERROR
Running examples in ‘lipidmapsR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: compound_search
> ### Title: A function for compound search
> ### Aliases: compound_search
>
> ### ** Examples
>
>
> # Fetch compound name from LM_ID
> compound_search("lm_id", "LMFA01010001", "name")
Error in curl::curl_fetch_memory(url, handle = handle) :
Timeout was reached [www.lipidmaps.org]:
Connection timed out after 10002 milliseconds
Calls: compound_search ... request_fetch.write_memory -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.4
Check: examples
Result: ERROR
Running examples in ‘lipidmapsR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: compound_search
> ### Title: A function for compound search
> ### Aliases: compound_search
>
> ### ** Examples
>
>
> # Fetch compound name from LM_ID
> compound_search("lm_id", "LMFA01010001", "name")
input name
"LMFA01010001" "Palmitic acid"
>
> # Fetch all compound fields from LM_ID
> compound_search("lm_id", "LMFA01010001", "all")
input
"LMFA01010001"
regno
"101"
lm_id
"LMFA01010001"
name
"Palmitic acid"
sys_name
"hexadecanoic acid"
synonyms
"Cetylic acid; Palmitate; n-Hexadecanoic acid; C16:0; Aethalic acid "
abbrev
"FA 16:0"
core
"Fatty Acyls [FA]"
main_class
"Fatty Acids and Conjugates [FA01]"
sub_class
"Straight chain fatty acids [FA0101]"
exactmass
"256.240231"
formula
"C16H32O2"
inchi
"InChI=1S/C16H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h2-15H2,1H3,(H,17,18)"
inchi_key
"IPCSVZSSVZVIGE-UHFFFAOYSA-N"
kegg_id
"C00249"
hmdb_id
"HMDB0000220"
chebi_id
"15756"
lipidbank_id
"DFA0016"
pubchem_cid
"985"
smiles
"OC(CCCCCCCCCCCCCCC)=O"
>
> # Fetch all compound fields as text from LM_ID
> compound_search("lm_id", "LMFA01010001", "all", "txt")
[1] "input\tLMFA01010001\nregno\t101\nlm_id\tLMFA01010001\nname\tPalmitic acid\nsys_name\thexadecanoic acid\nsynonyms\tCetylic acid; Palmitate; n-Hexadecanoic acid; C16:0; Aethalic acid \nabbrev\tFA 16:0\ncore\tFatty Acyls [FA]\nmain_class\tFatty Acids and Conjugates [FA01]\nsub_class\tStraight chain fatty acids [FA0101]\nexactmass\t256.240231\nformula\tC16H32O2\ninchi\tInChI=1S/C16H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16(17)18/h2-15H2,1H3,(H,17,18)\ninchi_key\tIPCSVZSSVZVIGE-UHFFFAOYSA-N\nkegg_id\tC00249\nhmdb_id\tHMDB0000220\nchebi_id\t15756\nlipidbank_id\tDFA0016\npubchem_cid\t985\nsmiles\tOC(CCCCCCCCCCCCCCC)=O\n\n"
>
> # Fetch compound smiles from PubChem CID
> compound_search("pubchem_cid", "985", "smiles")
Error in curl::curl_fetch_memory(url, handle = handle) :
Timeout was reached [www.lipidmaps.org]:
Connection timed out after 10002 milliseconds
Calls: compound_search ... request_fetch.write_memory -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.4
Check: examples
Result: ERROR
Running examples in 'lipidmapsR-Ex.R' failed
The error most likely occurred in:
> ### Name: compound_search
> ### Title: A function for compound search
> ### Aliases: compound_search
>
> ### ** Examples
>
>
> # Fetch compound name from LM_ID
> compound_search("lm_id", "LMFA01010001", "name")
Error in curl::curl_fetch_memory(url, handle = handle) :
Timeout was reached [www.lipidmaps.org]:
Connection timed out after 10009 milliseconds
Calls: compound_search ... request_fetch.write_memory -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-release-windows-x86_64