Last updated on 2025-12-16 09:50:06 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.18 | 220.22 | 230.40 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 207.00 | 217.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 234.00 | 244.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 238.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/138s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.833, system: 0.089, elapsed: 2.666 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.790, system: 0.286, elapsed: 17.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.017, elapsed: 0.540 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.124, system: 0.229, elapsed: 11.611 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.005, elapsed: 0.535 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.693, system: 0.659, elapsed: 34.330 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.625, system: 0.036, elapsed: 4.197 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.861, system: 0.233, elapsed: 16.080 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.020, elapsed: 0.325 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.301, system: 0.327, elapsed: 5.692 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.011, elapsed: 0.301 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.755, system: 0.658, elapsed: 27.652 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.759, system: 0.093, elapsed: 2.071 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.852, system: 0.250, elapsed: 16.687 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.012, elapsed: 0.309 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.921, system: 0.182, elapsed: 5.625 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.017, elapsed: 0.266 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.202, system: 0.245, elapsed: 1.046 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.794, system: 0.851, elapsed: 26.952 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.042, elapsed: 2.213 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.614, system: 0.102, elapsed: 14.613 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.013, elapsed: 0.261 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.011, system: 0.192, elapsed: 6.319 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.008, elapsed: 0.329 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.855, system: 0.501, elapsed: 17.033 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.130, system: 0.885, elapsed: 41.753 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.605, system: 0.038, elapsed: 2.645 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.550, system: 0.076, elapsed: 17.094 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.015, elapsed: 0.384 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.823, system: 0.190, elapsed: 6.839 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.396 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.928, system: 0.351, elapsed: 28.347 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.043, elapsed: 3.278 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.724, system: 0.095, elapsed: 20.395 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.472 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.841, system: 0.205, elapsed: 6.168 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.250 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.090, system: 0.388, elapsed: 31.791 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.585, system: 0.030, elapsed: 2.940 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.484, system: 0.055, elapsed: 17.513 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.012, elapsed: 0.331 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.746, system: 0.180, elapsed: 6.170 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.281 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.095, system: 0.264, elapsed: 1.158 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.944, system: 0.574, elapsed: 29.575 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.645, system: 0.030, elapsed: 2.742 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.490, system: 0.052, elapsed: 15.626 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.689, system: 0.178, elapsed: 6.412 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.371 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.608, system: 0.471, elapsed: 20.122 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.458, system: 0.773, elapsed: 46.799 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64