Last updated on 2025-07-04 09:49:55 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 12.00 | 206.47 | 218.47 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 11.23 | 199.74 | 210.97 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 392.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
| r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
| r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
| r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 181.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 171.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 226.00 | 246.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.047, elapsed: 2.175 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.031, system: 0.112, elapsed: 12.055 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.238 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.696, system: 0.179, elapsed: 4.923 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.103, system: 0.375, elapsed: 20.431 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.491, system: 0.036, elapsed: 2.183 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.171, system: 0.085, elapsed: 12.947 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.266 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.757, system: 0.170, elapsed: 6.410 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.278 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.305, system: 0.326, elapsed: 22.925 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.589, system: 0.035, elapsed: 2.874 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.048, system: 0.082, elapsed: 15.844 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.703, system: 0.183, elapsed: 5.977 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.273 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.183, system: 0.229, elapsed: 1.321 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.496, system: 0.570, elapsed: 27.658 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.036, elapsed: 4.096 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.038, system: 0.076, elapsed: 23.317 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.013, elapsed: 0.453 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.804, system: 0.189, elapsed: 6.286 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.230 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.377, system: 0.476, elapsed: 14.983 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.728, system: 0.828, elapsed: 50.675 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/114s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.466, system: 0.040, elapsed: 1.582 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.158, system: 0.047, elapsed: 8.325 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.232 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.663, system: 0.195, elapsed: 5.324 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.005, elapsed: 0.231 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.153, system: 0.321, elapsed: 16.332 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.601, system: 0.042, elapsed: 2.051 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.107, system: 0.107, elapsed: 12.973 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.604, system: 0.180, elapsed: 6.151 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.207 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.210, system: 0.362, elapsed: 22.425 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.633, system: 0.038, elapsed: 2.306 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.031, system: 0.076, elapsed: 17.989 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.531 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.642, system: 0.183, elapsed: 10.306 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.453 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.076, system: 0.247, elapsed: 1.636 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.351, system: 0.583, elapsed: 34.650 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.530, system: 0.032, elapsed: 2.890 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.986, system: 0.060, elapsed: 12.517 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.201 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.556, system: 0.167, elapsed: 4.527 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.174 seconds]
Starting 50 permutations...
... serially ...
|
| | 0%
|
|== | 2%
|
|=== | 4%
|
|===== | 6%
|
|====== | 8%
|
|======== | 10%
|
|========== | 12%
|
|=========== | 14%
|
|============= | 16%
|
|============== | 18%
|
|================ | 20%
|
|================== | 22%
|
|=================== | 24%
|
|===================== | 26%
|
|====================== | 28%
|
|======================== | 30%
|
|========================== | 32%
|
|=========================== | 34%
|
|============================= | 36%
|
|============================== | 38%
|
|================================ | 40%
|
|================================== | 42%
|
|=================================== | 44%
|
|===================================== | 46%
|
|====================================== | 48%
|
|======================================== | 50%
|
|========================================== | 52%
|
|=========================================== | 54%
|
|============================================= | 56%
|
|============================================== | 58%
|
|================================================ | 60%
|
|================================================== | 62%
|
|=================================================== | 64%
|
|===================================================== | 66%
|
|====================================================== | 68%
|
|======================================================== | 70%
|
|========================================================== | 72%
|
|=========================================================== | 74%
|
|============================================================= | 76%
|
|============================================================== | 78%
|
|================================================================ | 80%
|
|================================================================== | 82%
|
|=================================================================== | 84%
|
|===================================================================== | 86%
|
|====================================================================== | 88%
|
|======================================================================== | 90%
|
|========================================================================== | 92%
|
|=========================================================================== | 94%
|
|============================================================================= | 96%
|
|============================================================================== | 98%
|
|================================================================================| 100%
... computing probabilities from permuted values ...
... done. [user: 10.084, system: 0.442, elapsed: 13.734 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.154, system: 0.745, elapsed: 35.079 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64