Last updated on 2025-12-17 09:50:03 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.65 | 217.31 | 227.96 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 170.00 | 180.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 208.00 | 218.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 244.00 | 268.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.661, system: 0.053, elapsed: 2.067 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.444, system: 0.115, elapsed: 12.174 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.017, elapsed: 0.369 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.856, system: 0.205, elapsed: 4.759 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.175 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.889, system: 0.419, elapsed: 20.280 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.470, system: 0.033, elapsed: 1.526 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.250, system: 0.111, elapsed: 9.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.013, elapsed: 0.222 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.031, system: 0.233, elapsed: 5.517 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.321 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.661, system: 0.421, elapsed: 17.988 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.704, system: 0.070, elapsed: 2.564 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.525, system: 0.234, elapsed: 11.905 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.228 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.067, system: 0.252, elapsed: 7.478 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.014, elapsed: 0.459 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.257, system: 0.265, elapsed: 2.116 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.565, system: 0.887, elapsed: 25.868 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.644, system: 0.053, elapsed: 4.033 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.426, system: 0.131, elapsed: 18.600 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.014, elapsed: 0.337 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.155, system: 0.275, elapsed: 6.977 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.011, elapsed: 0.303 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.124, system: 0.830, elapsed: 16.432 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.392, system: 1.350, elapsed: 48.144 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/147s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.583, system: 0.040, elapsed: 2.887 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.618, system: 0.056, elapsed: 19.704 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.016, elapsed: 0.371 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.772, system: 0.188, elapsed: 6.816 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.290 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.912, system: 0.330, elapsed: 31.083 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.642, system: 0.036, elapsed: 2.945 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.478, system: 0.070, elapsed: 14.269 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.340 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.005, system: 0.237, elapsed: 6.952 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.009, elapsed: 0.308 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.069, system: 0.395, elapsed: 25.812 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.661, system: 0.056, elapsed: 2.877 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.727, system: 0.200, elapsed: 18.866 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.016, elapsed: 0.394 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.694, system: 0.178, elapsed: 5.898 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.005, elapsed: 0.272 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.101, system: 0.244, elapsed: 1.063 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.224, system: 0.736, elapsed: 30.549 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.637, system: 0.034, elapsed: 2.748 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.548, system: 0.109, elapsed: 14.579 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.287 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.941, system: 0.199, elapsed: 5.636 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.205 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.824, system: 0.527, elapsed: 24.423 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.980, system: 0.912, elapsed: 48.813 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64