Last updated on 2025-10-22 09:50:54 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.10 | 45.74 | 515.94 | 561.68 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.10 | 34.20 | 395.98 | 430.18 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.10 | 249.00 | 661.56 | 910.56 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.10 | 262.00 | 330.54 | 592.54 | ERROR | |
| r-devel-windows-x86_64 | 1.1.10 | 46.00 | 543.00 | 589.00 | OK | |
| r-patched-linux-x86_64 | 1.1.10 | 44.10 | 495.06 | 539.16 | OK | |
| r-release-linux-x86_64 | 1.1.10 | 46.27 | 497.83 | 544.10 | OK | |
| r-release-macos-arm64 | 1.1.10 | 18.00 | 242.00 | 260.00 | OK | |
| r-release-macos-x86_64 | 1.1.10 | 46.00 | 391.00 | 437.00 | OK | |
| r-release-windows-x86_64 | 1.1.10 | 46.00 | 535.00 | 581.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.10 | 20.00 | 235.00 | 255.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.10 | 46.00 | 447.00 | 493.00 | NOTE | |
| r-oldrel-windows-x86_64 | 1.1.10 | 60.00 | 718.00 | 778.00 | OK |
Version: 1.1.10
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘tepr.Rmd’ using rmarkdown
Quitting from tepr.Rmd:25-82 [quickstart]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `retrievechrom()`:
!
The genome hg38 was not found with the function rtracklayer::SeqinfoForUCSCGenome. Check the spelling or verify if the genome is available on UCSC. The connection to UCSC can also have some hickup. You can callagain the function using the chromtab parameter: chromtab <- rtracklayer::SeqinfoForUCSCGenome(genomename).
---
Backtrace:
▆
1. └─tepr::retrievechrom(genomename, verbose = FALSE, filterchrom = FALSE)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tepr.Rmd' failed with diagnostics:
The genome hg38 was not found with the function rtracklayer::SeqinfoForUCSCGenome. Check the spelling or verify if the genome is available on UCSC. The connection to UCSC can also have some hickup. You can callagain the function using the chromtab parameter: chromtab <- rtracklayer::SeqinfoForUCSCGenome(genomename).
--- failed re-building ‘tepr.Rmd’
SUMMARY: processing the following file failed:
‘tepr.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.1.10
Check: installed package size
Result: NOTE
installed size is 5.0Mb
sub-directories of 1Mb or more:
doc 2.0Mb
extdata 2.6Mb
Flavor: r-oldrel-macos-x86_64