Add arguments to write_fasta() to control line and
block lengths.
Fix warning message when a non-valid character is automatically replaced by X with AA.
On CRAN request, fix tags/attributes for HTML documentation.
Add support for fuzzy matching in
seq_detect_pattern() and
seq_crop_pattern().
Fixed missing output in seq_spellout() for
collapse = NULL.
getOption() instead of options() in
function arguments (Functions aliview,
seaview, print_sequences,
print.bioseq_dna, print.bioseq_rna and
print.bioseq_aa).Fix bug when importing fasta with > characters in sequence names.
Fix bug when exporting fasta (write_fasta) with NA
sequences.
On CRAN request, add a reference to Keck (2020) in description.
New logo.
Add CITATION file.
New system to disable colors in the console when printing
sequences using global options:
options(bioseq.color = "none").
New system to set GUI paths for seaview() and
aliview() using global options
(bioseq.seaview.exec and
bioseq.aliview.exec).
seq_extract_pattern,
seq_split_pattern, seq_split_kmer).seaview() and aliview()
was improved to explain the exec arguments.