b8b0ab7fd0a26d8b40f1d49f65e91059 *DESCRIPTION
5d82e9946ace180a66d2fe6db26780f1 *LICENSE
a5946f4e1f92e1c40d4aee0ed835d8a8 *NAMESPACE
aa425a24b3159c76085f265f540fb058 *R/RcppExports.R
75b9969a44027a08a11d346325930c71 *R/calculate_gene_rank.R
c6d322165785a8fa5b40ffa0f41b6806 *R/data.R
92c5ea9f02ac4626611e55b765f10b47 *R/inferCSN-package.R
12bd6bf62c7ca026e54b688c11b7abb9 *R/inferCSN.R
4f0be4fe38f3cc015d4d425fd61ef286 *R/meta_cells.R
1cee401cef992b74e1d49848c9592168 *R/network_evaluation.R
8bb53fe8206981d0f65bd0c00dfe6e5c *R/network_sift.R
433b80aae4defca0292279799c0698be *R/network_visualization.R
befd1fb68d237707bec28efb031e34ce *R/plotting_functions.R
60aa0bb5c4bc74b9f93f018cc08efea8 *R/reexports.R
9e2d646828f381fb803be678fb930711 *R/single_network.R
b47a24670568057556a98cc833935c5d *R/sparse_regression_model.R
1527ad945bb9c54adf3cf74e2ac5e669 *R/subsampling.R
17eb06619f4d22c3f3d5f8986a439710 *R/utils.R
27de12543915ff70316d9b9bde8b8f96 *README.md
c865cc831c3370c46b93efe15036051c *data/example_ground_truth.rda
7876ce105fe62fea51999bf207905aab *data/example_matrix.rda
e14e9b714f5e7617ed2c4b727cc48e34 *data/example_meta_data.rda
c6a07e36e26defaa5eccf28f682baef2 *inst/CITATION
40b856dbf3053d3abe708f2d80266f14 *man/calculate_accuracy.Rd
e69da5cc07cbd93ab35c28adbd870c78 *man/calculate_auc.Rd
b62d51a965bd829d7de0a5f80403e910 *man/calculate_auprc.Rd
17c17c598d8ab8bbdd572556d8c93c3a *man/calculate_auroc.Rd
896463d09f145a91f205cc1ad886ecc5 *man/calculate_f1.Rd
d9dec65016942bc1b290fd0027c31b13 *man/calculate_gene_rank.Rd
b90a49c07930e929764db83c4f4457bf *man/calculate_ji.Rd
9229a2f07df8e9f624b3084fd6956a45 *man/calculate_metrics.Rd
c7b0c8463923c4193328d2d0ec1991ae *man/calculate_precision.Rd
06abc66947834843cd833c492e53149b *man/calculate_recall.Rd
af7eaa6ebf2a74c093996c7cee0388c2 *man/calculate_si.Rd
bea92ebfc3cc63a4375cd260d58a1e42 *man/example_ground_truth.Rd
369f179d33e62b3546d42b46591e907d *man/example_matrix.Rd
4395d138df2bb37a4603150b74963ca3 *man/example_meta_data.Rd
4cde6e83b2d3b96a27c12cd1ba8e0091 *man/figures/inferCSN.svg
687f65ddfca71c6022b1580e2c4a62a2 *man/figures/logo.svg
bebe6bc49d03db3b112f638876ccdb65 *man/filter_sort_matrix.Rd
1fba4d554ae4fa54ce9f6bdd71d8925e *man/fit_srm.Rd
9da52b2afe9ba6e3fda2c536f2e49b68 *man/inferCSN-package.Rd
19f8c05ffde2fbf704dcc74d1bb68b8b *man/inferCSN.Rd
d439f0fb0863336713ad6b4c831076ed *man/infercsn_logo.Rd
36dd518d8156c9d4f722b9bf29f84151 *man/meta_cells.Rd
dee45111a8df65718a9d17cdffdc61fb *man/network_format.Rd
0cdd2abfb40dfd0ce9daac0abc65b27a *man/network_sift.Rd
df637444d1a17ca7fcf49685d6c007fa *man/plot_coefficient.Rd
d29fb708df560a236129ed6b9db95017 *man/plot_coefficients.Rd
6f7bb33da89512e61466f34af68a0035 *man/plot_contrast_networks.Rd
2737587577407ab623345aa3f5c12849 *man/plot_dynamic_networks.Rd
a444ee5517e972ed3398f1323a9bb0a4 *man/plot_edges_comparison.Rd
cc1aa690f8bda9bcc4f287bda8e5a5a2 *man/plot_embedding.Rd
db1913dae1516eaa481b55684622c435 *man/plot_histogram.Rd
c412126847fe95f939363e0d929e940b *man/plot_network_heatmap.Rd
b3e1f5da90ddd093b47c3d23a9bfc2de *man/plot_scatter.Rd
c9a937c5d035960ae1cfdcb5c1e9331e *man/plot_static_networks.Rd
d5ac88f4b53994fd16f115e99e4e0cc7 *man/prepare_binary_predictions.Rd
f67625601209e5de2051f10ebf4afbbd *man/print.infercsn_logo.Rd
d4a887b9d692fe8e9db0892a52b4faf4 *man/single_network.Rd
694b22f3da98b51ad858f56159317efe *man/subsampling.Rd
a998bf61f525c49a5e1353bb3974bfed *man/weight_sift.Rd
e0665eac2bf9bfe4871b93bbfed30532 *src/RcppExports.cpp
bd3a59ca4ed0ec23ab566da4e240d763 *src/filter_sort_matrix.cpp
5386e845ca01638adb96a48dc6425de1 *src/network_evaluation.cpp
f56e6293bd11b0264bd2df58a9257a7e *src/network_format.cpp
396526becd1fa68ebef888b991732e92 *src/network_format.h
fff059072aefa614129999f59c120209 *src/weight_sift.cpp
